The PoseView user guide can be downloaded here. PoseView is also available as a web service at. The RCSB PDB uses PoseView to provide to its users 2D images of the macromolecule-ligand complexes on the Structure Summary page. PoseView may be used on the command-line for high-throughput processing of multiple data, or via an intuitive graphical user-interface, and is free of charge for academic research or evaluation purposes.īioSolveIT is proud to contribute PoseView as a community service. Various display options can be chosen, such as show/hide of interaction energies, show/hide hydrophobic contacts, as well as several labeling options. The ligand itself is drawn utilizing the 2Ddraw engine according to chemical drawing conventions. Hydrophobic interactions are illustrated as smooth contour lines between the respective amino acids and the ligand. The 2D depiction shows hydrogen bonds as dashed lines between the interaction partners on either side. The interaction diagrams can be exported in various formats (PNG-, PDF- or XFIG files), with the latter providing the opportunity to modify the graphic in the full-featured graphics program XFIG. Such input may come directly from crystal structures or be computed, for example, by a docking program. PoseView is a free to academics tool that automatically generates publication-quality 2D structure-diagrams of protein-ligand complexes provided as 3D-input.
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